Alvarez, J. A., D. S. Jansen, C. Shafer, J. Di Donato. In Review. Observations of the phenology of the threatened Alameda whipsnake (Masticophis lateralis euyxanthus). Fish and Game.
Alvarez, J. A., G. Kittleson, K. A. Davidson, L. M. Asseo. In Review. Potential injury and mortality to the southwestern pond turtle (Actinemys pallida) during restoration and maitenance activites. Herpetology Notes.
Polvorosa Kline, M., J. A. Alvarez, and N. Parizeau. In Review. Kleptoparasitism of harvester ants by the giant kangaroo rat in the Carrizo Plain, California. Ecosphere.
Alvarez, J. A., and J. T. Wilcox. In Review. Nocturnal movements of California red-legged frogs (Rana draytonii) adjacent to occupied aquatic habitat. Ecological Restoration.
Alvarez, J. A., M. A. Shea, J. T. Wilcox. In Review. Rana draytonii (California red-legged frog). Climbing ability. Herpetological Review.
Alvarez, J. A., M. A. Shea, J. T. Wilcox, S. M. Foster. In Review. Ambystoma californiense (California tiger salamander) Habitat Use. Herpetological Review.
Alvarez, J. A., M. A. Shea, S. M. Foster. In Review. Rana draytonii (California red-legged frog). Reservoir Use. Herpetological Review.
Alvarez, J. A., C. Dunn, and M. A. Shea. In Review. Colonization and use of constructed wetlands by California red-legged frogs. Wetlands.
Wilcox, J. T., Padgett-Flohr, G. E., Johnson, J. R., and Alvarez, J. A. 2015. Possible phenotypic influence of superinvasive alleles on larval California tiger salamanders (Ambystoma californiense). American Midland Naturalist 173:168–175. PDF
Allaback, M. L., D. M. Laabs, J. A. Alvarez, J. Anderson. In Press. Thamnophis sirtalis tetrataenia (San Francisco garter snake). Upland habitat use. Herpetological Review 46:278. PDF.
Alvarez, J. A., K. A. Davidson, and S. M. Foster. 2014. Actinemys marmorata (Western Pond Turtle). Nest predation. Herpetological Review 45:307–308. PDF
Alvarez, J. A., D. G. Cook, J. L. Yee, M. G. van Hattem, D. R. Fong, R. Fisher. 2013. Comparative microhabitat characteristics as oviposition sites of the California red-legged frog. Herpetological Conservation and Biology 8:539–551. PDF
Alvarez, J. A., M. A. Shea, J. T. Wilcox, M. L. Allaback, S. M. Foster, G. E. Padgett-Flohr, J. L. Haire. 2013. Sympatry in California tiger salamander and California red-legged frog breeding habitat within their overlapping range. California Fish and Game 99:42-48. PDF
Alvarez, J. A. 2013. Rana draytonii (California red-legged frog). Cannibalism. Herpetological Review 44:126-127. PDF
Alvarez, J. A., M. A. Shea, S. M. Foster. 2013. Rana draytonii (California red-legged frog). Association with Beaver. Herpetological Review 44:127-128. PDF
Alvarez, J. A., E. Solana, S. M. Foster 2013. Agalychnis callidryas (Red-eyed tree frog). Predation. Herpetological Review 44: 117-118. PDF
Alvarez, J. A. 2011. Bufo boreas (Western toad). Davian Behavior. Herpetological Review 42:408-409. PDF
Alvarez, J. A. 2006. Actinemys marmorata. (Pacific Pond Turtle) Refugia. Herpetological Review 37:339-340. PDF
Alvarez, J. A. 2006. Masticophis lateralis euryxanthus (Alameda whipsnake) Habitat. Herpetological Review 37:233. PDF
Alvarez, J. A. 2006. Use of artificial basking substrate to detect and monitor Pacific pond turtles (Emys marmorata). Western North American Naturalist 66:129-131. PDF
Alvarez, J. A., M.A. Shea, A. Murphy. 2005. A compilation of observations of Alameda whipsnakes outside of typical habitat. Transactions of the Western Section of the Wildlife Society 41:21-25. PDF
Alvarez, J. A. 2005. Unanticipated predation of California red-legged frog at constructed wetlands (California). Ecological Restoration 21:66-67. PDF
Alvarez, J. A. 2004. Overwintering California tiger salamander (Ambystoma californiense) larvae. Herpetological Review 35:344. PDF
Alvarez, J. A. 2004. Rana aurora draytonii (California red-legged frog) Microhabitat. Herpetological Review 35:162–163. PDF
Alvarez, J. A., C. Dunn, and A. Zuur. 2004. Response of California red-legged frogs to removal of non-native fish. Transactions of the Western Section of the Wildlife Society 38/39:9–12. PDF
Alvarez, J. A. 2004. An easily constructed Tuttle trap for bats. Wildlife Society Bulletin 32:264–266. PDF
Alvarez, J. A. 2004. Use of artificial egg laying substrate to detect California tiger salamanders (Ambystoma californiense). Herpetological Review 35: 45–46. PDF
Fellers, G. M., A Launer, G. Rathbun, S. Bobzien, J. Alvarez, D. Sterner, R. Seymour, and M, Westphal. 2001. Overwintering tadpoles in the California red-legged frog (Rana aurora draytonii). Herpetological Review 32:156–157. PDF
